BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036A06SP1|AL430153
(919 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1512 1151 0.0
>3x_Contig1512
Length = 8803
Score = 1151 bits (580), Expect = 0.0
Identities = 593/597 (99%), Gaps = 1/597 (0%)
Strand = Plus / Minus
Query: 318 gtcatttgaaggtctttataggatggttaaagaacaataccctgatgtgaatatcaggtc 377
||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 8803 gtcatntgaaggtctntataggatggttaaagaacaataccntgatgtgaatatcaggtc 8744
Query: 378 aggacaggatatgtttgatatatcgctatttcgagaagaagagaaaatcagtgtttttgc 437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8743 aggacaggatatgtttgatatatcgctatttcgagaagaagagaaaatcagtgtttttgc 8684
Query: 438 ttcattcatggagaatctatattcacacacaattcaagccaaaccaacaaagacgcacga 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8683 ttcattcatggagaatctatattcacacacaattcaagccaaaccaacaaagacgcacga 8624
Query: 498 atttatagcacatttaaagaacaggggcaaacttttacgttgttacacacaaaatattga 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8623 atttatagcacatttaaagaacaggggcaaacttttacgttgttacacacaaaatattga 8564
Query: 558 tgggttagaagaaatgttaggattacagatgtcaaaatctagggatgcagatcaatcatt 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8563 tgggttagaagaaatgttaggattacagatgtcaaaatctagggatgcagatcaatcatt 8504
Query: 618 ctccatccaatggaaaaatttggatgttgtacaattacatggagatttgacaacactctc 677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8503 ctccatccaatggaaaaatttggatgttgtacaattacatggagatttgacaacactctc 8444
Query: 678 atgcacacagtgtttcaaagtcttctcatggtcaaggcattggaaacgttgtttgaagaa 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8443 atgcacacagtgtttcaaagtcttctcatggtcaaggcattggaaacgttgtttgaagaa 8384
Query: 738 cggagaacttccagtgtgtccaaagtgtctcgaaaagaataacagaagatctatcgaggg 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8383 cggagaacttccagtgtgtccaaagtgtctcgaaaagaataacagaagatctatcgaggg 8324
Query: 798 taaaagatgtttgggtcattcgggtatgctacgtcctaacatagttctttacggcgagaa 857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8323 taaaagatgtttgggtcattcgggtatgctacgtcctaacatagttctttacggcgagaa 8264
Query: 858 ccacccaaacgcagattttattacacagggattgaacatggatatc-acagagggaa 913
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 8263 ccacccaaacgcagattttattacacagggattgaacatggatatcaacagagggaa 8207
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7043
Number of Sequences: 1807
Number of extensions: 7043
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 919
length of database: 10,358,551
effective HSP length: 16
effective length of query: 903
effective length of database: 10,329,639
effective search space: 9327664017
effective search space used: 9327664017
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)